Anduril works on Linux. The easiest way to get started is using Docker. Alternatively, you can install natively.
More detailed installation instructions: User Guide.
docker run -ti --rm anduril/core anduril -h
This prints the help message of the Anduril command line tool. Next step: Hello world.
Native installation: Ubuntu
Install time: 30-60 min
sudo apt-get install ant mercurial openjdk-8-jdk python r-base-dev export ANDURIL_HOME=~/anduril hg clone https://bitbucket.org/anduril-dev/anduril -r stable "$ANDURIL_HOME" export PATH="$ANDURIL_HOME/bin:$PATH" anduril build anduril install tools
Native installation: Other Linux
sudo apt-get install command above with commands that install the following mandatory dependencies:
- Java 7 or 8
- Apache Ant
- Python 2.7
- R 3.0+
After a basic installation, you may want to install additional bundles using
anduril install BUNDLE-NAME.
|microarray||DNA/RNA microarray analysis|
|sequencing||DNA/RNA sequencing analysis (NGS)|
|tools||Commonly used tools. Already installed above.|